Insertion junction: CLIP2.031803_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.031803
Chromosome:chromosome 3
Location:6644760
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g195100 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCTTAATCCATCCCGTGAAGCGCGAACCCAGTCCTTTGGGCGCAGTTT
Internal bar code:TAGGCTGGGGGCTGCACTTAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3322
LEAP-Seq percent confirming:87.3239
LEAP-Seq n confirming:62
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:GTACGCCTGATGGATGAGGG
Suggested primer 2:CCCGTTCTCATCCGTGTTCA