Insertion junction: CLIP2.031804_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.031804
Chromosome:chromosome 3
Location:7497419
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g205550 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCTGTTGCCTGCGTTAAGCGTGTCTGGGCCCCATGTCTGGCCAAGTTA
Internal bar code:GGGTGTTGGGTAAATATAACCG

Confirmation - LEAP-Seq

LEAP-Seq distance:3586
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:CACCACCACTCGGAATGTGA
Suggested primer 2:TTGCTTTGCTTGCATGCGAT