Insertion junction: CLIP2.031816_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.031816
Chromosome:chromosome 13
Location:4495974
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g602950 (1 of 1) IPR027050 - Nuclease SbcCD subunit C intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAGTCATGTCAGCAGTGCGAGCCGCGCGCGGACCCCGTCGCCCAACTAG
Internal bar code:TTTGTGGCTCATTCGGAGTATA

Confirmation - LEAP-Seq

LEAP-Seq distance:730
LEAP-Seq percent confirming:45.4545
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CCAAGACGCAGAAGCAGAGA
Suggested primer 2:GAGAAGGGTTGGGGTGGATG