Insertion junction: CLIP2.031820_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.031820
Chromosome:chromosome 4
Location:3586847
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g228550 (1 of 2) PTHR31140//PTHR31140:SF1 - FAMILY NOT NAMED // B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGGGGCTAGAGCGGCAAGTAACACCCCGTTCCAAACGCCCCCGCCCCT
Internal bar code:CAGTCGCTAGGTAACGAAGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1125
LEAP-Seq percent confirming:88.4615
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTCTTGTTGCTTGCTGGG
Suggested primer 2:CGTGCGGGCGTGTAAATAAG