Insertion junction: CLIP2.031829_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.031829
Chromosome:chromosome 8
Location:3844858
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g381600 (1 of 1) IPR000104//IPR007112//IPR009009 - Antifreeze protein, type I // Expansin/pollen allergen, DPBB domain // RlpA-like double-psi beta-barrel domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCATCGCGGTTATCAGCAAGGATGGCACACAGCACGCACGCCGCGCGG
Internal bar code:ACTTTTGCTGTGCCATAACGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:108
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTCACGCTAGCAACTCCA
Suggested primer 2:GTATGAGTCGCCCGAGAGTG