Insertion junction: CLIP2.031848_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.031848
Chromosome:chromosome 6
Location:6768786
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g800725 3'UTR_intron
Cre06.g800726 (1 of 80) IPR003882 - Pistil-specific extensin-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTAGGATGGCCCTCGCTGGCCTCGCCGGATGCTCAGCACTGCCTTCCCA
Internal bar code:CAGGGTGTAGACTCGTATGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2814
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGCGTTGCCTAACAAACA
Suggested primer 2:GCTGGGGTAAGGGAGGAGTA