Insertion junction: CLIP2.031848_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.031848
Chromosome:chromosome 6
Location:6768789
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g800725 3'UTR_intron
Cre06.g800726 (1 of 80) IPR003882 - Pistil-specific extensin-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGCCAAGGAAATTGCTTGCCGGTTCCACGCAGCAAGACGATTGGCTGC
Internal bar code:TCTGGCACCAGGGGCTGAGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:787
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGGGGTAAGGGAGGAGTA
Suggested primer 2:GCTGCGTTGCCTAACAAACA