Insertion junction: CLIP2.031853_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.031853
Chromosome:chromosome 13
Location:248316
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g563700 FAP369 Flagellar Associated Protein 369; (1 of 1) IPR001680//IPR011047//IPR017986//IPR027417 - WD40 repeat // Quinonprotein alcohol dehydrogenase-like superfamily // WD40-repeat-containing domain // P-loop containing nucleoside triphosphate hydrolase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTGCCGCCGCCAGCAGCGCGTCTCGGTCTGTGCGGTACTTGCAGCGCGA
Internal bar code:CTGGGCACTGATAGTGGGGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:194
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTTGTTTTCACGACTGCG
Suggested primer 2:CTTCACCTCCACCTCCACAC