Insertion junction: CLIP2.031862_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.031862
Chromosome:chromosome 3
Location:3844688
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g170200 (1 of 2) PTHR10857:SF0 - PROTEIN GEM-4 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAAATGGAACACCAGCCTGACCGAGGCGAATGGCACAGGAGACAAAGGGA
Internal bar code:GAGGCCTCTTTTGTGTTAGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2162
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:75
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:90

Suggested primers for confirmation by PCR

Suggested primer 1:GCACGGAGATGATCGCAAAC
Suggested primer 2:TTGGGTGGCCAAGTGTCTTT