Insertion junction: CLIP2.031868_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.031868
Chromosome:chromosome 1
Location:1432119
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g007600 (1 of 2) 5.5.1.6 - Chalcone isomerase / Chalcone--flavanone isomerase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTCGCACACCTGATGTACACACAGGCCCTGCCTCTCGCACCCTCTCCC
Internal bar code:CGTCATAGGTTGGTTACTAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:813
LEAP-Seq percent confirming:68.75
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTGTGCATGTGTTTGGCC
Suggested primer 2:TGAAGAAGCCTTGCCCTAGC