Insertion junction: CLIP2.031873_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.031873
Chromosome:chromosome 8
Location:1390385
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g364151 intron
lncRNA_TCONS_00154037 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCACCAGGAATCGCACCCGCATCCCTTTTCGGGAGCCAGCACATGCAGC
Internal bar code:GTCAATAACTGGCGTCAAATCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1676
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTTGCTGGCCCTGTAGAT
Suggested primer 2:TGTATGTGCACCCCTGACAC