Insertion junction: CLIP2.031878_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.031878
Chromosome:chromosome 5
Location:1235594
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g800529 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGCGGCGGCAGCGTCTCGTCGCTGTCGGTGACGCCGCGGCTGCCGCCG
Internal bar code:GCAAGCGAACAGTTTGTAGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2669
LEAP-Seq percent confirming:96.5517
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:CGATACTCCTTGCTGGCACA
Suggested primer 2:ACCTCACTCCCATCACCAGT