Insertion junction: CLIP2.031878_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.031878
Chromosome:chromosome 9
Location:6647435
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g416450 (1 of 14) PF04577 - Protein of unknown function (DUF563) (DUF563) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGTGGGATGAGCAACACCTGTGCGCATCAAGCCTATGTTGACACACGC
Internal bar code:GATTCCCCGAATGTGGTTTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:4070
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:107
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:107

Suggested primers for confirmation by PCR

Suggested primer 1:GCACGTACCCCTCTTGTTGA
Suggested primer 2:GTCAGGCCTATGGTACGTCG