Insertion junction: CLIP2.031881_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.031881
Chromosome:chromosome 16
Location:2771176
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g662250 (1 of 1) PF15901 - Sortilin, neurotensin receptor 3, C-terminal (Sortilin_C) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTCCACAAAGCCCGCCACCGCGCCGTTGGAGTCCGCGGTCAGGTTGGTC
Internal bar code:TGGTCGCGGAAATTCCTACGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:283
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTGATTGCGGTAGCCATG
Suggested primer 2:GGACAGCCGTTTCACAACAC