Insertion junction: CLIP2.031887_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.031887
Chromosome:chromosome 11
Location:4081064
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g481000 SNRK2F snRK1 family in Chlamydomonas, subgroup 2; (1 of 1) PTHR24343//PTHR24343:SF175 - SERINE/THREONINE KINASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCGGGCCGTGCCGCGGCCCCTCACACGTTCAGTGCCGCCATCCTGCCT
Internal bar code:TGGCCATATCGAGGGGAGGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:247
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CACACCCACCCCAGTTATCC
Suggested primer 2:TTCAATGGCATTGCGCACAA