Insertion junction: CLIP2.031887_4

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.031887
Chromosome:chromosome 11
Location:4081434
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g481000 SNRK2F snRK1 family in Chlamydomonas, subgroup 2; (1 of 1) PTHR24343//PTHR24343:SF175 - SERINE/THREONINE KINASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAACATGTGGATGACGCAGCACACTGCACATGCCAGGGAGGACCACGGCA
Internal bar code:TGGCCATATCGAGGGGAGGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:5118
LEAP-Seq percent confirming:98.9247
LEAP-Seq n confirming:92
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:93

Suggested primers for confirmation by PCR

Suggested primer 1:TTCAATGGCATTGCGCACAA
Suggested primer 2:CACACCCACCCCAGTTATCC