Insertion junction: CLIP2.031905_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.031905
Chromosome:chromosome 9
Location:5031374
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g405800 (1 of 1) PTHR11911//PTHR11911:SF109 - INOSINE-5-MONOPHOSPHATE DEHYDROGENASE RELATED // SUBFAMILY NOT NAMED CDS
Cre09.g405850 NUO7 NADH:ubiquinone oxidoreductase 49 kDa ND7 subunit; (1 of 1) K03935 - NADH dehydrogenase (ubiquinone) Fe-S protein 2 (NDUFS2) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTCTTGCCCAGCGCGCTAGCCACGCCGTGCGTCCCATGGGGCCGCGGC
Internal bar code:AGGGGTATCTAAACACGAGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:4239
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:64
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:TCGCTTCTTTGCAAAGTGGC
Suggested primer 2:ACGCTCCCTAAACACAGAGC