Insertion junction: CLIP2.031928_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.031928
Chromosome:chromosome 13
Location:5248061
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g607800 (1 of 29) IPR013320 - Concanavalin A-like lectin/glucanase domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTTAGAGGGGGAACCGTCGAGTAAGGATGGAGTGAACATGGGCAGCGG
Internal bar code:GGATTTGGCGACCGTTGTCCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:510
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CTTTCACAACTGGCCACGTG
Suggested primer 2:GATGGTGGTTGAGGGGAAGG