Insertion junction: CLIP2.031938_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.031938
Chromosome:chromosome 12
Location:3131541
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g500715 (1 of 5) 6.2.1.3 - Long-chain-fatty-acid--CoA ligase / Lignoceroyl-CoA synthase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACCCAGACGGGGTGTTTCCACCGTCCAACGTACGAGAAAGCAGTATAAG
Internal bar code:TAGAATACGCGCCTATGTATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1058
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GGCCACCATCATGTACACCA
Suggested primer 2:GATGCCAACAACAACCCACC