Insertion junction: CLIP2.031938_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.031938
Chromosome:chromosome 12
Location:3131542
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g500715 (1 of 5) 6.2.1.3 - Long-chain-fatty-acid--CoA ligase / Lignoceroyl-CoA synthase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGGCTTGCTTGGGATTGGAACCAACAACCGTACCCCCGCCCCCCCCCC
Internal bar code:TAGAATACGCGCCTATGTATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:289
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:GATGCCAACAACAACCCACC
Suggested primer 2:GGCCACCATCATGTACACCA