Insertion junction: CLIP2.031947_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.031947
Chromosome:chromosome 2
Location:1178692
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g081300 (1 of 13) IPR000086//IPR015797 - NUDIX hydrolase domain // NUDIX hydrolase domain-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGGGTGGACAGCAACTTCGGTGTGTGCCACAGACCACTCAGTGCGCTG
Internal bar code:ATCGGAGTCGAAGGTTCGCATC

Confirmation - LEAP-Seq

LEAP-Seq distance:2109
LEAP-Seq percent confirming:95.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GTATTCTTGGCGTCGGTTGC
Suggested primer 2:CGTATGTGCCCAGGAACACT