Insertion junction: CLIP2.031949_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.031949
Chromosome:chromosome 5
Location:3471370
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g233400 (1 of 52) 2.7.11.22 - Cyclin-dependent kinase / Cdk-activating protein kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAATGGGTGAACGAAGTTGAGTGCACGGCTGACACCGCCGGCCCCCACTG
Internal bar code:TCAGGGGTGGGAAATATTCCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:4615
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:79
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:79

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCAATGGATATCCCGGCA
Suggested primer 2:CCATCAGCAGCCGTAATTGC