Insertion junction: CLIP2.031949_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.031949
Chromosome:chromosome 5
Location:3471390
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g233400 (1 of 52) 2.7.11.22 - Cyclin-dependent kinase / Cdk-activating protein kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTACCCCTCAAGACCTATCCGCTTCCTACGACCGACAGGCCTAGAGGCG
Internal bar code:TCAGGGGTGGGAAATATTCCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2136
LEAP-Seq percent confirming:97.619
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:CCATCAGCAGCCGTAATTGC
Suggested primer 2:GAGCAATGGATATCCCGGCA