Insertion junction: CLIP2.031963_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.031963
Chromosome:chromosome 6
Location:5563696
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g287150 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCCCGACGCACAGGCCCGCACGGCCGCTGGTACAGCTCTTCTTCTCGC
Internal bar code:TTCCCTATGCTTACAGTCTCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3591
LEAP-Seq percent confirming:96.9697
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:GATCCGCATCTGAGTCCTGG
Suggested primer 2:CAAACACGCACACATACGCA