Insertion junction: CLIP2.031966_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.031966
Chromosome:chromosome 12
Location:5977764
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g534100 COL,CON2 (1 of 3) PTHR31319//PTHR31319:SF10 - FAMILY NOT NAMED // ZINC FINGER PROTEIN CONSTANS-RELATED; CONSTANS-like protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGACAGCCTGGGCGGCGGCGGCGGCTGGGGCGGGCTGGCATTGCCCGG
Internal bar code:CCTGATGAAGGGGGTCGTGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:6007
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:83
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:83

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAGCATCTGACACACACA
Suggested primer 2:GCGCGCAATCATCTTGCTAA