Insertion junction: CLIP2.031966_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.031966
Chromosome:chromosome 12
Location:5977767
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g534100 COL,CON2 (1 of 3) PTHR31319//PTHR31319:SF10 - FAMILY NOT NAMED // ZINC FINGER PROTEIN CONSTANS-RELATED; CONSTANS-like protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCTCCCTCGAACTCCATCTTAATCTCGTGGAAGGCCATGGCGTCAAGCA
Internal bar code:TTCGGTTTAGTATTGATTTCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2905
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCGCAATCATCTTGCTAA
Suggested primer 2:AGCAGCATCTGACACACACA