Insertion junction: CLIP2.031988_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.031988
Chromosome:chromosome 12
Location:5849278
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g533300 SRE2 Pre-mRNA splicing factor, SR-related; (1 of 89) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGGAGGACATTGCGGCAGCCCCCCACGGCGCGCGAGAGGCGTACGCACT
Internal bar code:AGGCGTCGAGGCGCATTTTGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:923
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCTGCTGCTGTTGTTGTT
Suggested primer 2:ACATGAACTCATTTGCGGCG