Insertion junction: CLIP2.031994_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.031994
Chromosome:chromosome 2
Location:973621
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00054624

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCATCATCATGTTCGGCCAAAACGTTCCGGTTCTAACGGCAGTTCCCTC
Internal bar code:CATAACCCTTAATGGGATGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2960
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:ACACCAAGGCTGTTTCCCAA
Suggested primer 2:TGCATGCGCCATATTCGTTG