Insertion junction: CLIP2.031997_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.031997
Chromosome:chromosome 3
Location:123656
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g143847 (1 of 3) PF07386 - Protein of unknown function (DUF1499) (DUF1499) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAAGGGGGCATACGTAAATATTAGCGGACAGGAGCTTGGCGCGCGGTTA
Internal bar code:CCACAGCGCTCTGAACTTGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:4831
LEAP-Seq percent confirming:95.9184
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCATGTTCTCGCAGCACT
Suggested primer 2:CGGAGTACCACGCCACTATC