Insertion junction: CLIP2.032007_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.032007
Chromosome:chromosome 2
Location:1155298
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g081100 (1 of 2) PF02893 - GRAM domain (GRAM) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCATGGGTCGGCTGGCCACGACTCCGCTATTTGGCAGAATATGTAAATG
Internal bar code:TACGTTTTAGATTGTCAGGATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1795
LEAP-Seq percent confirming:53.5714
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTGCTGCAATTCAGGGAT
Suggested primer 2:TTCAGTGATTGCCGGCTTCT