Insertion junction: CLIP2.032012_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.032012
Chromosome:chromosome 11
Location:1825303
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467500 (1 of 1) PF05664 - Plant family of unknown function (DUF810) (DUF810) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCCATTCCCCGCCCCGCACATGCAATCCCCCTCCCCCACACGCCCGTA
Internal bar code:GGTCTGTGGCTCTCCGGAGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1199
LEAP-Seq percent confirming:9.30233
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:39
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGGTAAAGGGAAGGCTGG
Suggested primer 2:ACCTCTCATCTCCTCCCACC