Insertion junction: CLIP2.032016_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.032016
Chromosome:chromosome 6
Location:1194781
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g258350 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCTGATGCTACTGAAGCAGCACGGCTGGGCGTCGTGAGCAGGCGGGTG
Internal bar code:GTGCTGTCGGTCAACTAGTCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2054
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:ATACTCATCCCCGGGTGTCA
Suggested primer 2:CTGGTATCATTTGCGCTGGC