Insertion junction: CLIP2.032020_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.032020
Chromosome:chromosome 9
Location:1282633
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g400800 (1 of 4) IPR000719//IPR001229//IPR002290//IPR011009//IPR020635 - Protein kinase domain // Jacalin-like lectin domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGGCACCGTCCGGCAGCCCGGCACGTGCGACCCTGCACAGCTTGCAGG
Internal bar code:ATTGTGGTCAGAATAATCGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:3306
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:AACTTCACACACACGCTTGC
Suggested primer 2:CGAGGTCGATGTAGGTGTCG