Insertion junction: CLIP2.032025_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.032025
Chromosome:chromosome 8
Location:4423460
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g385350 (1 of 5) PTHR32467//PTHR32467:SF15 - FAMILY NOT NAMED // AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR SMZ-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTCGAAAGCACCAGCTGCTGCTCACTGCCCTGTTACAGCTTACCTGGGC
Internal bar code:TATTTTCGGACGATACGTAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3778
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:AGTGAGTCCAGCATCCAACG
Suggested primer 2:ACGCCAGCTGGAGACTAAAC