Insertion junction: CLIP2.032033_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.032033
Chromosome:chromosome 15
Location:1207736
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g801718 NCL58 Nuclear Control of chloroplast-Like 58; (1 of 39) PF08373 - RAP domain (RAP) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCACGCGCCCCAGCACGCCCTCCACCACCACCTCCATCCGCACCGAAAC
Internal bar code:CAGTTTTTGAGTGGTCCTAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3205
LEAP-Seq percent confirming:70.5882
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:85

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTGTCCAACATCCTGCTG
Suggested primer 2:CTTTTCCGCTGATTGCTGCC