Insertion junction: CLIP2.032036_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.032036
Chromosome:chromosome 2
Location:4909014
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g110000 (1 of 1) PF07974//PF13920 - EGF-like domain (EGF_2) // Zinc finger, C3HC4 type (RING finger) (zf-C3HC4_3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGCGCAAAAGCAGAGACGAGCCCGTGCGGCCCCGCCCCACCGGCTGCA
Internal bar code:CGGAACCTCGTGATATGGTATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1352
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CAACCGCTTCTCGTTGCAAA
Suggested primer 2:GGCGTATGATCTCCTTGCGA