Insertion junction: CLIP2.032039_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.032039
Chromosome:chromosome 3
Location:1801071
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g154050 ABCA1B putative ABC transporter; (1 of 173) IPR029058 - Alpha/Beta hydrolase fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTCCCAAGCAGCCTGCGCCCGGCCCGAACGGACAGAGCGCTTACCCGC
Internal bar code:TACGTTTTTGGTAGTCCAGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3019
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:ATGACTGCCACGCACACTAA
Suggested primer 2:TGCCTCACACAATCGTCGAA