Insertion junction: CLIP2.032052_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.032052
Chromosome:chromosome 4
Location:3735124
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g229350 (1 of 1) 2.1.1.290 - tRNA(Phe) (7-(3-amino-3-carboxypropyl)wyosine(37)-O)-methyltransferase / tRNA-yW synthesizing enzyme-4 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGTGGTGTGGCGTCACCGCCCACGCCGCGCCCACCTGCGGCTGCTTGC
Internal bar code:GGAACTAATATCATCGCGGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2153
LEAP-Seq percent confirming:97.2222
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCGAAACGTTGAAGGCAG
Suggested primer 2:ATACACGTGTACGCGCTCAT