Insertion junction: CLIP2.032056_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.032056
Chromosome:chromosome 6
Location:1464502
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g260350 DNJ6 (1 of 1) PF00226//PF14308 - DnaJ domain (DnaJ) // X-domain of DnaJ-containing (DnaJ-X); DnaJ-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGACCACAGGAGCGGTGGGCAGGTGGCCAGCGCGGAGATGGCTCGCGAGC
Internal bar code:ATAGCTAACGGTTTTCACGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2498
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTGCATGTCGTACACCTT
Suggested primer 2:CATGTGTGTGCCTGTGTGTG