Insertion junction: CLIP2.032065_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.032065
Chromosome:chromosome 13
Location:4524113
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g603100 GT90-48,GT90F48 GT90 family protein 48; (1 of 52) PF05686 - Glycosyl transferase family 90 (Glyco_transf_90) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGGGGGCCGGGCACGAAGGCGGTAGCGGCGGCGGTAGGCTTGGGCCCG
Internal bar code:CAGATGATGGTCAAGCAAGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:561
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTGTCTTAGGCGCACGAA
Suggested primer 2:GAAGCTTTTCACGCTGGCAA