Insertion junction: CLIP2.032067_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.032067
Chromosome:chromosome 3
Location:1775487
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g153850 (1 of 10) PTHR31867:SF1 - EXPANSIN-A1-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGGCTCGTGTGGCTACGGGTACATCTATCCAACGGATCCGCTGGGATG
Internal bar code:GTCAGTAAAACGAGTGCGAGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:3011
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CAAATGCCGCGATAGTTGGG
Suggested primer 2:TTACCAGCTGACCTGCTTGG