Insertion junction: CLIP2.032080_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.032080
Chromosome:chromosome 6
Location:2852504
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g272250 PHC27 Putative pherophorin-chlamydomonas homolog; (1 of 71) PF12499 - Pherophorin (DUF3707) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACCCGCGCCCGCACACTCACAGATCTGGATCTGCGCGTAGTCCAGCGT
Internal bar code:AGAGGGTTCACAAGAGACAGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:406
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TTCTGCTGCATTGACGACCT
Suggested primer 2:AGCCCTTGACCGTGATCTTG