Insertion junction: CLIP2.032084_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.032084
Chromosome:chromosome 3
Location:6579034
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre03.g194600 (1 of 2) IPR000719//IPR011009//IPR013221 - Protein kinase domain // Protein kinase-like domain // Mur ligase, central intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGCATGTCAGCCCGGCCCAGGCCGGAACGTAAACAAGCCGACTAAAGA
Internal bar code:CAGCATGAAAAATCACGGCACG

Confirmation - LEAP-Seq

LEAP-Seq distance:3327
LEAP-Seq percent confirming:11.1111
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CGGCCAATTGTCCGCAATAG
Suggested primer 2:GCAGATCCACCTCCATCTGG