Insertion junction: CLIP2.032084_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.032084
Chromosome:chromosome 3
Location:6579044
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g194600 (1 of 2) IPR000719//IPR011009//IPR013221 - Protein kinase domain // Protein kinase-like domain // Mur ligase, central intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGATGCTTAACTCAGCCTCGCGCGGACGTTGGACGAGCGAGTCGCGCTG
Internal bar code:TCAAACTACAGAGATTGTAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2879
LEAP-Seq percent confirming:18.75
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGATCCACCTCCATCTGG
Suggested primer 2:CGGCCAATTGTCCGCAATAG