Insertion junction: CLIP2.032102_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.032102
Chromosome:chromosome 9
Location:3246797
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g394843 (1 of 1) PF07967 - C3HC zinc finger-like (zf-C3HC) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCGCCAGCGGCATGGCTGTAGCGCCCTTTGCGGCGGGCGGCAGCTACAG
Internal bar code:GGGAATGAATTCAGTTCAGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2075
LEAP-Seq percent confirming:47.8261
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:AGAGGGTCACTGCCGATAGT
Suggested primer 2:TGCTCGCTCTTCTACTCCCT