Insertion junction: CLIP2.032117_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.032117
Chromosome:chromosome 8
Location:4160614
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g383600 SRR21 Scavenger receptor cysteine rich (SRCR) protein; (1 of 1) IPR001190//IPR017448//IPR029062 - SRCR domain // SRCR-like domain // Class I glutamine amidotransferase-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACACATGGTGTGAGAGCAGAAGATAGGAAGCAAGTCATGGTACGAAATG
Internal bar code:AAGGCTACCTCGCTTATGGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1151
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:AACAACAGTGTTCCGGGGTT
Suggested primer 2:CATGTGTGCGCGGATAACAG