Insertion junction: CLIP2.032121_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.032121
Chromosome:chromosome 13
Location:3243680
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g585600 (1 of 1) IPR011333//IPR019832 - POZ domain // Manganese/iron superoxide dismutase, C-terminal intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGAGGGACACGCGTGAGTCTAGTAGTACCCCGGCGGGGGCGAGGCAGA
Internal bar code:AGGGGTTTTATACATTATGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1648
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CATGGCATGCACACACAACA
Suggested primer 2:GAGAATCGCACCGGCAAATC