Insertion junction: CLIP2.032128_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.032128
Chromosome:chromosome 9
Location:2726027
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g391500 ATG9 (1 of 1) K17907 - autophagy-related protein 9 (ATG9); Autophagy related CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGGAGTGCTTGCAAAACGCGAAGGCAAAAAGCACTGCCACACAAGTCC
Internal bar code:GTCAGATAACAACAACAGCACA

Confirmation - LEAP-Seq

LEAP-Seq distance:1398
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TACCGCTTCACTTGCCAGAG
Suggested primer 2:TTCACTCGTCCTCTTGTGCC