Insertion junction: CLIP2.032133_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.032133
Chromosome:chromosome 2
Location:2863087
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre02.g800207 (1 of 8) PF06011 - Transient receptor potential (TRP) ion channel (TRP) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGGCCGCGCCGCAGGCGCCAACCGGCCCGCGCCAGCCAAAACAGCACC
Internal bar code:TTGGGATCTGGCCCTAGTCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:704
LEAP-Seq percent confirming:14.2857
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TCACCTACTTCAACGTGGCC
Suggested primer 2:GACACTGACAACGGCACAAC