Insertion junction: CLIP2.032139_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.032139
Chromosome:chromosome 3
Location:7870559
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g202700 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGATGGCTGTTGGTGCAGCAACAGCTGTGGGTTTAGGTGGCTGCCGCGA
Internal bar code:AATCGGTAATCTCCTGGCCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2086
LEAP-Seq percent confirming:87.3016
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:63

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGTCGTCATACCTTGCCG
Suggested primer 2:ACCTGTAGCCGTTTACACCG